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1.
Artigo em Inglês | MEDLINE | ID: mdl-38145517

RESUMO

Currently, growing data sources and long-running algorithms impede user attention and interaction with visual analytics applications. Progressive visualization (PV) and visual analytics (PVA) alleviate this problem by allowing immediate feedback and interaction with large datasets and complex computations, avoiding waiting for complete results by using partial results improving with time. Yet, creating a progressive visualization requires more effort than a regular visualization but also opens up new possibilities, such as steering the computations towards more relevant parts of the data, thus saving computational resources. However, there is currently no comprehensive overview of the design space for progressive visualization systems. We surveyed the related work of PV and derived a new taxonomy for progressive visualizations by systematically categorizing all PV publications that included visualizations with progressive features. Progressive visualizations can be categorized by well-known visualization taxonomies, but we also found that progressive visualizations can be distinguished by the way they manage their data processing, data domain, and visual update. Furthermore, we identified key properties such as uncertainty, steering, visual stability, and real-time processing that are significantly different with progressive applications. We also collected evaluation methodologies reported by the publications and conclude with statistical findings, research gaps, and open challenges. A continuously updated visual browser of the survey data is available at visualsurvey.net/pva.

2.
IEEE Trans Vis Comput Graph ; 29(10): 4047-4061, 2023 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-35679374

RESUMO

We propose Composite Parallel Coordinates, a novel parallel coordinates technique to effectively represent the interplay of component alternatives in a system. It builds upon a dedicated data model that formally describes the interaction of components. Parallel coordinates can help decision-makers identify the most preferred solution among a number of alternatives. Multi-component systems require one such multi-attribute choice for each component. Each of these choices might have side effects on the system's operability and performance, making them co-dependent. Common approaches employ complex multi-component models or involve back-and-forth iterations between single components until an acceptable compromise is reached. A simultaneous visual exploration across independently modeled but connected components is needed to make system design more efficient. Using dedicated layout and interaction strategies, our Composite Parallel Coordinates allow analysts to explore both individual properties of components as well as their interoperability and joint performance. We showcase the effectiveness of Composite Parallel Coordinates for co-dependent multi-attribute choices by means of three real-world scenarios from distinct application areas. In addition to the case studies, we reflect on observing two domain experts collaboratively working with the proposed technique and communicating along the way.

3.
Comput Struct Biotechnol J ; 20: 471-484, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-35070169

RESUMO

For many decades, the clinical unmet needs of primary Sjögren's Syndrome (pSS) have been left unresolved due to the rareness of the disease and the complexity of the underlying pathogenic mechanisms, including the pSS-associated lymphomagenesis process. Here, we present the HarmonicSS cloud-computing exemplar which offers beyond the state-of-the-art data analytics services to address the pSS clinical unmet needs, including the development of lymphoma classification models and the identification of biomarkers for lymphomagenesis. The users of the platform have been able to successfully interlink, curate, and harmonize 21 regional, national, and international European cohorts of 7,551 pSS patients with respect to the ethical and legal issues for data sharing. Federated AI algorithms were trained across the harmonized databases, with reduced execution time complexity, yielding robust lymphoma classification models with 85% accuracy, 81.25% sensitivity, 85.4% specificity along with 5 biomarkers for lymphoma development. To our knowledge, this is the first GDPR compliant platform that provides federated AI services to address the pSS clinical unmet needs.

4.
IEEE Trans Vis Comput Graph ; 28(9): 3070-3081, 2022 09.
Artigo em Inglês | MEDLINE | ID: mdl-33434130

RESUMO

Event sequences are central to the analysis of data in domains that range from biology and health, to logfile analysis and people's everyday behavior. Many visualization tools have been created for such data, but people are error-prone when asked to judge the similarity of event sequences with basic presentation methods. This article describes an experiment that investigates whether local and global alignment techniques improve people's performance when judging sequence similarity. Participants were divided into three groups (basic versus local versus global alignment), and each participant judged the similarity of 180 sets of pseudo-randomly generated sequences. Each set comprised a target, a correct choice and a wrong choice. After training, the global alignment group was more accurate than the local alignment group (98 versus 93 percent correct), with the basic group getting 95 percent correct. Participants' response times were primarily affected by the number of event types, the similarity of sequences (measured by the Levenshtein distance) and the edit types (nine combinations of deletion, insertion and substitution). In summary, global alignment is superior and people's performance could be further improved by choosing alignment parameters that explicitly penalize sequence mismatches.


Assuntos
Algoritmos , Gráficos por Computador , Humanos , Alinhamento de Sequência
5.
IEEE Trans Vis Comput Graph ; 23(1): 111-120, 2017 01.
Artigo em Inglês | MEDLINE | ID: mdl-27514054

RESUMO

Visual analytics (VA) is typically applied in scenarios where complex data has to be analyzed. Unfortunately, there is a natural correlation between the complexity of the data and the complexity of the tools to study them. An adverse effect of complicated tools is that analytical goals are more difficult to reach. Therefore, it makes sense to consider methods that guide or assist users in the visual analysis process. Several such methods already exist in the literature, yet we are lacking a general model that facilitates in-depth reasoning about guidance. We establish such a model by extending van Wijk's model of visualization with the fundamental components of guidance. Guidance is defined as a process that gradually narrows the gap that hinders effective continuation of the data analysis. We describe diverse inputs based on which guidance can be generated and discuss different degrees of guidance and means to incorporate guidance into VA tools. We use existing guidance approaches from the literature to illustrate the various aspects of our model. As a conclusion, we identify research challenges and suggest directions for future studies. With our work we take a necessary step to pave the way to a systematic development of guidance techniques that effectively support users in the context of VA.

7.
IEEE Trans Vis Comput Graph ; 19(12): 2257-66, 2013 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-24051792

RESUMO

We present MotionExplorer, an exploratory search and analysis system for sequences of human motion in large motion capture data collections. This special type of multivariate time series data is relevant in many research fields including medicine, sports and animation. Key tasks in working with motion data include analysis of motion states and transitions, and synthesis of motion vectors by interpolation and combination. In the practice of research and application of human motion data, challenges exist in providing visual summaries and drill-down functionality for handling large motion data collections. We find that this domain can benefit from appropriate visual retrieval and analysis support to handle these tasks in presence of large motion data. To address this need, we developed MotionExplorer together with domain experts as an exploratory search system based on interactive aggregation and visualization of motion states as a basis for data navigation, exploration, and search. Based on an overview-first type visualization, users are able to search for interesting sub-sequences of motion based on a query-by-example metaphor, and explore search results by details on demand. We developed MotionExplorer in close collaboration with the targeted users who are researchers working on human motion synthesis and analysis, including a summative field study. Additionally, we conducted a laboratory design study to substantially improve MotionExplorer towards an intuitive, usable and robust design. MotionExplorer enables the search in human motion capture data with only a few mouse clicks. The researchers unanimously confirm that the system can efficiently support their work.


Assuntos
Actigrafia/métodos , Algoritmos , Gráficos por Computador , Bases de Dados Factuais , Movimento/fisiologia , Software , Interface Usuário-Computador , Interpretação Estatística de Dados , Humanos , Armazenamento e Recuperação da Informação/métodos
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